Cancer Genome Interpreter - Identification of therapeutically actionable genomic alterations in tumors

Alterations

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Cancer type

(CANCER) Any cancer type
- (HEMATO) Hematologic malignancies
  - (MAS) Mastocytosis
    - (SM) Systemic mastocytosis
    - (MCLK) Mast cell leukemia
  - (LK) Leukemia
    - (APML) Acute promyelocytic leukemia
    - (MKB) Megakaryoblastic leukemia
    - (TCPL) T-cell prolymphocytic leukemia
    - (AEL) Acute erythroid leukemia
    - (ECL) Eosinophilic chronic leukemia
    - (MML) Myelomonocyitic leukemia
    - (CLL) Chronic lymphocytic leukemia
    - (CNL) Chronic neutrophilic leukemia
    - (LL) Lymphoblastic leukemia
      - (ALL) Acute lymphoblastic leukemia
        
        (TCALL) T-cell acute lymphoblastic leukemia
    - (AML) Acute myeloid leukemia
    - (HCL) Hairy-Cell leukemia
    - (CML) Chronic myeloid leukemia
      - (ACML) Atypical chronic myeloid leukemia
    - (LGLK) Large granular leukemia
  - (MYMA) Myeloma
    - (MM) Multiple myeloma
  - (CMP) Chronic myeloproliferitve neoplasm
    - (PV) Polycitemia vera
    - (ECL) Eosinophilic chronic leukemia
    - (MY) Myelofibrosis
      - (IM) Inflammatory myofibroblastic
  - (LY) Lymphoma
    - (MUCLY) Mucosa-associated lymphoma
    - (CTCL) Cutaneous T-cell lymphoma
    - (NHLY) Non-hodking lymphoma
      - (MALT) MALT lymphoma
      - (NKTL) Extranodal natural killer/T-cell lymphoma
      - (PTCL) Perypheral T-cell lymphoma
      - (SLL) Small lymphocytic lymphoma
    - (THYM) Thymic
    - (ALCL) Anaplastic large cell lymphoma
    - (BCL) B cell lymphoma
      - (LPL) Lymphoblastic lymphoma
        
        (WM) Waldenström macroglobulinemia
      - (LBCL) Large B-Cell lymphoma
        
        (DLBCL) Difuse large B Cell lymphoma
    - (CNSLY) Central nervous system lymphoma
    - (HLY) Hodking lymhpoma
    - (BLY) Burkitt lymphoma
    - (FL) Follicular lymphoma
    - (MCL) Mantle cell lymphoma
  - (EOS) Eosinophilia
    - (ECL) Eosinophilic chronic leukemia
    - (HES) Hyper eosinophilic advanced snydrome
  - (MDS) Myelodisplasic syndrome
    - (MDPS) Myelodisplasic proliferative syndrome
- (SOLID) Solid tumors
  - (FRS) Female reproductory system
    - (CER) Cervix
      - (CESC) Cervix squamous cell
    - (U) Uterus
      - (ULMS) Uterine leiomyosarcoma
      - (ED) Endometrium
        
        (UCEC) Uterine corpus endometroid carcinoma
        
        (EDS) Endometrial stromal
        
        (EDA) Endometrial adenocarcinoma
      - (UCS) Uterine carcinosarcoma
    - (OV) Ovary
      - (OVSC) Ovary small cell
      - (OVE) Ovary epithelial cell
      - (OVRT) Ovary rhabdoid tumor
      - (OVCC) Ovary clear cell
      - (SCGS) Sex-cord gonadal stromal
        
        (LEY) Leydig cell adenoma
      - (FGCT) Female germ cell tumor
      - (OVG) Ovary granulosa cell
      - (OVSE) Ovary serous
  - (HNC) Head an neck
    - (HNSC) Head an neck squamous
    - (OC) Oral cavity
      - (TOSC) Tongue squamous cell
      - (SG) Salivary glands
        
        (MYEP) Myoepithelioma
        
        (ADCC) Adenoid cystic carcinoma
        
        (SGA) Salivary glands adenoma
        
        (SGM) Salivary glands mucoepidermoid
      - (OCSC) Oral cavity squamous cell
  - (NS) Nervous system
    - (SS) Sensory system
      - (EY) Eye
        
        (RB) Retinoblastoma
        
        (UVM) Uveal melanoma
    - (PNS) Peripheral nervous system
      - (PLEN) Plexiform neurofibroma
      - (NF) Neurofibroma
      - (NB) Neuroblastoma
      - (SCHW) Schwannoma
      - (MPN) Malignant peripheral nerve sheat tumor
    - (CNS) Central nervous system
      - (G) Glioma
        
        (PG) Pediatric glioma
        
        (AOG) Anaplastic oligodendroglioma
        
        (PHEO) Pheochromocytoma
        
        (PCPG) Pheochromocytoma and paraganglioma
        
        (MA) Malignant astrocytoma
        
        (APA) Anaplastic astrocytoma
        
        (GCA) Giant cell astrocytoma
        
        (PIA) Pilocityc astrocytoma
        
        (LGG) Lower grade glioma
        
        (GB) Glioblastoma
        
        (GBM) Glioblastoma multiforme
      - (DNT) Dysembryoplastic neuroepithelial tumour
      - (MEN) Meningioma
      - (CNSLY) Central nervous system lymphoma
      - (MB) Medulloblastoma
      - (B) Brain
  - (MRS) Male reproductory system
    - (PRAD) Prostate adenocarcinoma
    - (T) Testis
      - (MGCT) Male germ cell tumor
        
        (NSMGCT) Non-seminomatous germ cell tumor
        
        (TER) Teratoma
        
        (MMGCT) Mixed germ cell tumor
        
        (SMGCT) Seminomatous germ cell tumor
  - (SK) Skin
    - (PEC) Perivascular epithelioid cell
    - (ALM) Acral lentigious melanoma
    - (MUCM) Mucosal melanoma
    - (CM) Cutaneous melanoma
    - (BCC) Basal cell carcinoma
    - (MERC) Merkel cell carcinoma
    - (SCC) Squamous cell carcinoma
    - (DFS) Dermatofibrosarcoma
  - (NEU) Neuroendocrine
    - (PAIS) Pancreas neuroendocrine
    - (SINNE) Small intestine neuroendocrine
  - (US) Urinary system
    - (R) Renal
      - (WT) Wilms tumor
      - (RCH) Renal chromophobe cell
      - (RPC) Renal papillary cell
      - (RCCC) Renal clear cell
    - (UTH) Urothelial
      - (UTUC) Upper tract urothelial carcinoma
    - (UTC) Urinary tract carcinoma
    - (BLCA) Bladder
      - (BLTC) Bladder transitional cell
  - (TX) Torax
    - (L) Lung
      - (NSCLC) Non-small cell lung
        
        (LUSC) Lung squamous cell
        
        (LUAD) Lung adenocarcinoma
      - (PPB) Pleuropulmonary blastoma
      - (SCLC) Small cell lung
      - (LAM) Lymphangioleiomyomatosis
    - (MESO) Mesothelioma
      - (PLMESO) Pleural mesothelioma
    - (BRCA) Breast adenocarcinoma
      - (BRCAL) Breast lobular
      - (BRCADC) Breast ductal
      - (BRCAMDLC) Breast mixed ductal and lobular
    - (PL) Pleura
      - (PPB) Pleuropulmonary blastoma
  - (MSKV) Musculoskeletal & vascular systems
    - (S) Sarcoma
      - (LEIS) Leiomyosarcoma
        
        (ULMS) Uterine leiomyosarcoma
      - (STS) Soft tissue sarcoma
      - (FIBS) Fibrosarcoma
      - (OS) Osteosarcoma
      - (CS) Chondrosarcoma
      - (DSRCT) Desmoplastic small round cell tumor
      - (MRT) Malignant rhabdoid tumor
        
        (OVRT) Ovary rhabdoid tumor
        
        (RHBDS) Rhabdomyosarcoma
      - (EWS) Ewing sarcoma
      - (DFS) Dermatofibrosarcoma
      - (CCS) Clear cell sarcoma
      - (RHBDS) Rhabdomyosarcoma
      - (HIS) Histiocytoma
        
        (HISLC) Lagerhans cell histiocytosis
        
        (HISEC) Erdheim-Chester histiocytosis
        
        (FH) Fibrous histiocytoma
        
        (MFH) Myxoidfibrosarcoma
      - (AS) Angiosarcoma
      - (SYNS) Synovial sarcoma
      - (LIP) Liposarcoma
        
        (DLIP) Dedifferentiated liposarcoma
    - (HGP) Hemangiopericytoma
    - (DEST) Desmoid tumor
    - (NMC) NUT midline carcinoma
    - (MYX) Myxoma
    - (ABC) Aneurysmal bone cyst
  - (ES) Endocrine System
    - (PA) Pancreas
      - (PAAD) Pancreas adenocarcinoma
        
        (PAAC) Pancreas acinar
      - (PAIS) Pancreas neuroendocrine
    - (TH) Thyroid
      - (THCA) Thyroid carcinoma
        
        (THF) Thyroid follicular
        
        (THM) Thyroid medullary
      - (THP) Thyroid papillary
      - (THA) Thyroid adenoma
    - (PIGA) Pituitary gland adenoma
    - (PARG) Paraganglioma
    - (PATH) Parathyroid adenoma
    - (AG) Adrenal gland
      - (AA) Adrenal adenoma
      - (AC) Adrenal cortex
        
        (ACA) Adrenal cortex adenoma
        
        (ACC) Adrenal cortex carcinoma
  - (DS) Digestive system
    - (LVB) Liver & billiary tract
      - (CH) Cholangiocarcinoma
        
        (IHCH) Intrahepatic cholangiocarcinoma
      - (BT) Billiary tract
      - (H) Hepatic
        
        (HA) Hepatic adenoma
        
        (HC) Hepatic carcinoma
        
        (HB) Hepatic blastoma
    - (DT) Digestive tract
      - (GIST) Gastrointestinal stromal
      - (SIN) Small intestine
        
        (SINNE) Small intestine neuroendocrine
      - (FAP) Familial adeno poliposis
      - (ESCA) Esophagous
        
        (ESSC) Esophagous squamous cell
        
        (ESA) Esophagous adenocarcinoma
      - (REC) Rectal carcinoma
      - (OPH) Ororpharynx squamous cell
      - (READ) Rectal adenocarcinoma
      - (COREAD) Colorectal adenocarcinoma
      - (COC) Colon carcinoma
        
        (COCA) Colon adenocarcinoma
      - (PAMP) Periampullary adenoma
      - (ST) Stomach
        
        (GEJA) Gastroesophageal junction adenocarcinoma
        
        (STAD) Stomach adenocarcinoma
    - (NSPH) Nasopharyngeal

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